Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911181.1_cds_XP_016461185.1_54523
CDS Infomation

[gene=LOC107784553] [db_xref=GeneID:107784553] [protein=polyadenylate-binding protein 8-like] [protein_id=XP_016461185.1] [location=complement(join(21885..22127,23854..24057,24130..24309,25535..25672,26187..26276,26368..26445,26551..27207,27324..27442,28794..29034))] [gbkey=CDS]
Sequence

ATGGCACAGGTTCAGGTGCAGCAGCAGCAGCCACAGGGTGGTGTGAATAATGCTGGTGGT
GTGAACAACCAGTTTGTGACGTCACTGTACGTGGGTGACCTTGATGTCAATGTGACCGAT
TCACAGCTGTATGATCTGTTCAATCAGCTGGGGCAAGTTGTTTCGGTTCGGGTTTGCAGG
GACTTGACTAGCCAACGGTCGCTCGGTTATGGTTACGTCAATTATGGGAACCCTCAAGAT
GCTGCAAGGGCGTTGGAAGTGCTGAACTTTACTCCTCTCCATGGAAAGCCAATCAGGATA
ATGTACTCAAACCGAGACCCAACTATACGAAGAAGTGGCAATGGGAACATATTTATTAAG
AATTTGGACAAGGCAATTGACCACAAAGCATTACATGATACATTTTCTGCATTTGGAAAT
ATTCTCTCTTGTAAGGTAGCTGTGGATTCATCTGGTCAGTCCAAGGGCTATGGGTTTGTG
CAGTATGACAGTGAAGAAGCTGCCCAAAAAGCTATTGAGAAACTGAATGGTATGCTGCTG
AATGATAAGCAAGTATATGTAGGACCCTTCGTTCGTAAGCATGAAAGAGATATGGCTGTG
GATAAGACAAGATTTACCAATGTATTCGTGAAGAATTTATCTGAATCAACGTTAGAGGAA
GAGCTCCGGAAAATCTTTGGTGAATTTGGTGCTATTACTAGCGTCGCAGTTATGAAGGAT
GAAGATGGAAAATCCAGGTGCTTTGGATTTGTCAACTTTGAGAATGCTGAAGATGCTGCT
AGAGCTGTTGAAGCTCTGAATGGTTACAAATTGGATAACAAAGATTGGTTTGTAGGAAGA
GCTCAGAAGAAATCAGAGAGGGAAATGGAATTAAAACATCGGTTTGAGCAAAGTGCCAAG
GAGGCAGTTGACAAATCACAAGGTTTAAATCTATACATAAAAAATTTAGATGACAGCATT
AGTGATGAAAAGCTTAAGGAATTGTTCTCTCCGTATGGCACAATCACTTCATGCAAGGTT
ATGAGAGATCCTAGTGGGGTAAGCAAAGGATCAGGATTTGTTGCATTCTCAAACCCTGAA
GAGGCTTCAAGAGCGCTTTCGGAGATGAATGGAAAGATGGTTGTTAGCAAACCTCTGTAT
GTTGCCCTTGCGCAACGCAAGGAAGAGAGAAGAGCAAGGTTACAGGCTCAGTTTTCTCAG
ATGCGTCCAATTGCAATGGCATCTTCAGTTGCTCCTCGAATGCCGATGTACCCTCCTGGC
GGTCCTGGTCTAGGTCAACAAATATTCTATGGCCAGCCACAACCAGCTATGCTTCCCCCA
CAAGCTGGTTTTGGATATCAGCAGCAACTTGTACCTGGAATGAGGCCTGGTGGGGGACCC
ATGCCTAATTTCTTTATGCCCATGGTTCAGCAAGGGCAGCAAGGTCAACGTCCCGGAGGC
CGACGCGGAGGTGCTGTTCCATTGCAGCAGGGCCAGCAGCCAGTTCCATTGATGCAGCAA
CAGATGTTTCCAAGGGGGCGTGGATATCGGTATCCTCCAGGACGTGGCCTCCCCGATGTA
GCTTTTCCAGGTGTAGGTGGTGGCATGTTCTCTATCCCATATGATATGGGTGGCATGCCT
GTTCGTGATGCAGGAATTGTTCAACCTATTCCAGTAGGGGCTTTGGCTACTGCTCTGGCT
AATTCTTCTCCAACAGAGCAAAGGACGATGCTAGGTGAAAACTTGTACCCCTTGGTCGAA
CAGTTGGAGCCAGAAACGGCTGCCAAGGTGACTGGCATGCTCTTGGAGATGGACCAGACT
GAGGTATTGCACTTGCTTGAGTCGCCTGAAGCCCTGAAAGCCAAGGTTGCAGAGGCTATG
GAGGTTCTGAGGAATGTTTCTCAGCAGCAGTCGAGCAATCCGGCCGATCAGTTGGCTTCA
TTGTCACTGAATGATGGTCTGGTTTCTTAA

Peptide Sequence

PEP ID

XP_016461185.1
PEP Infomation

PREDICTED: polyadenylate-binding protein 8-like [Nicotiana tabacum]
Sequence

MAQVQVQQQQPQGGVNNAGGVNNQFVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCR
DLTSQRSLGYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIK
NLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLL
NDKQVYVGPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKD
EDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAK
EAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPE
EASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPG
GPGLGQQIFYGQPQPAMLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGG
RRGGAVPLQQGQQPVPLMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPYDMGGMP
VRDAGIVQPIPVGALATALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGMLLEMDQT
EVLHLLESPEALKAKVAEAMEVLRNVSQQQSSNPADQLASLSLNDGLVS

Transcript Sequence

Gene sequence data has not been registered.